Home > Term: five prime and three prime ends (5' and 3' ends)
five prime and three prime ends (5' and 3' ends)
A double stranded DNA (the double helix) always has an orientation or directionality. Because of this directionality, the nucleotides along one strand are heading in one direction (e.g. The 'ascending strand') and the others are heading the other (e.g. The 'descending strand'). For reasons of chemical nomenclature, the asymmetric termini of each strand are called the 5' and 3' ends (pronounced "five prime" and "three prime"). Nucleotide sequences are read by enzymes in the "5' to 3' direction". In a vertically oriented double helix, the 3' strand is said to be ascending while the 5' strand is said to be descending.
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